dbCAN Logo

Cluster: HRGMv2_3189_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3189_16 HRGMv2_3189_16_19 20115 21101 + 3.A.1.34.1
TC HRGMv2_3189_16 HRGMv2_3189_16_20 21197 22105 + 3.A.1.34.1
TC HRGMv2_3189_16 HRGMv2_3189_16_21 22098 22895 + 3.A.1.34.1
TF HRGMv2_3189_16 HRGMv2_3189_16_22 22939 23631 - Trans_reg_C
STP HRGMv2_3189_16 HRGMv2_3189_16_23 23609 25165 - HATPase_c | HisKA
TC HRGMv2_3189_16 HRGMv2_3189_16_24 25344 25910 + 3.A.1.25.3
sulfatase HRGMv2_3189_16 HRGMv2_3189_16_25 26023 26856 + S1_2
TC HRGMv2_3189_16 HRGMv2_3189_16_26 26939 28405 + 2.A.2.1.1
CAZyme HRGMv2_3189_16 HRGMv2_3189_16_27 28567 30057 + GH51_1
Gene ID: HRGMv2_3189_16_19
Type: TC
Location: 20115 - 21101 (+)
Gene ID: HRGMv2_3189_16_20
Type: TC
Location: 21197 - 22105 (+)
Gene ID: HRGMv2_3189_16_21
Type: TC
Location: 22098 - 22895 (+)
Gene ID: HRGMv2_3189_16_22
Type: TF
Location: 22939 - 23631 (-)
Gene ID: HRGMv2_3189_16_23
Type: STP
Location: 23609 - 25165 (-)
Gene ID: HRGMv2_3189_16_24
Type: TC
Location: 25344 - 25910 (+)
Gene ID: HRGMv2_3189_16_25
Type: sulfatase
Location: 26023 - 26856 (+)
Gene ID: HRGMv2_3189_16_26
Type: TC
Location: 26939 - 28405 (+)
Gene ID: HRGMv2_3189_16_27
Type: CAZyme
Location: 28567 - 30057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List