Cluster: HRGMv2_3189_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3189_4 | HRGMv2_3189_4_27 | 28568 | 31072 | + | 3.A.12.1.1 |
| TC | HRGMv2_3189_4 | HRGMv2_3189_4_28 | 31093 | 31563 | + | 3.A.11.1.4 |
| STP | HRGMv2_3189_4 | HRGMv2_3189_4_29 | 31560 | 32261 | + | Pribosyltran |
| CAZyme | HRGMv2_3189_4 | HRGMv2_3189_4_30 | 32701 | 34221 | + | GH30_4 |
| CAZyme | HRGMv2_3189_4 | HRGMv2_3189_4_31 | 34234 | 36477 | + | GH2 |
Gene ID: HRGMv2_3189_4_27
Type: TC
Location: 28568 - 31072 (+)
Type: TC
Location: 28568 - 31072 (+)
Gene ID: HRGMv2_3189_4_28
Type: TC
Location: 31093 - 31563 (+)
Type: TC
Location: 31093 - 31563 (+)
Gene ID: HRGMv2_3189_4_29
Type: STP
Location: 31560 - 32261 (+)
Type: STP
Location: 31560 - 32261 (+)
Gene ID: HRGMv2_3189_4_30
Type: CAZyme
Location: 32701 - 34221 (+)
Type: CAZyme
Location: 32701 - 34221 (+)
Gene ID: HRGMv2_3189_4_31
Type: CAZyme
Location: 34234 - 36477 (+)
Type: CAZyme
Location: 34234 - 36477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900547915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.