Cluster: HRGMv2_3189_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_293 | 315699 | 317216 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_3189_2 | HRGMv2_3189_2_294 | 317323 | 318147 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_295 | 318244 | 320436 | - | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_296 | 320581 | 321795 | - | 3.B.1.1.3 |
Gene ID: HRGMv2_3189_2_293
Type: CAZyme
Location: 315699 - 317216 (+)
Type: CAZyme
Location: 315699 - 317216 (+)
Gene ID: HRGMv2_3189_2_294
Type:
Location: 317323 - 318147 (+)
Type:
Location: 317323 - 318147 (+)
Gene ID: HRGMv2_3189_2_295
Type: pfam
Location: 318244 - 320436 (-)
Type: pfam
Location: 318244 - 320436 (-)
Gene ID: HRGMv2_3189_2_296
Type: TC
Location: 320581 - 321795 (-)
Type: TC
Location: 320581 - 321795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900547915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.