Cluster: HRGMv2_3189_CGC12
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3189
- CGC Family ID: CGCFAM_00814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_195 | 205597 | 207150 | - | 2.A.66.1.40 |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_196 | 207147 | 208241 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_197 | 208225 | 209217 | - | GT2 |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_198 | 209218 | 210198 | - | GT2 |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_199 | 210201 | 211199 | - | GT2 |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_200 | 211229 | 212155 | - | GT2 |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_201 | 212167 | 213357 | - | EpsG |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_202 | 213376 | 214362 | - | GT2 |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_203 | 214366 | 215439 | - | GT4 |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_204 | 215436 | 216578 | - | GT4 |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_205 | 216599 | 217516 | - | Transket_pyr | Transketolase_C |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_206 | 217530 | 218381 | - | Transketolase_N | E1_dh | DXP_synthase_N |
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_207 | 218413 | 219357 | - | 8.A.5.1.4 |
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_208 | 219362 | 220069 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_3189_2_195
Type: TC
Location: 205597 - 207150 (-)
Type: TC
Location: 205597 - 207150 (-)
Gene ID: HRGMv2_3189_2_196
Type: pfam
Location: 207147 - 208241 (-)
Type: pfam
Location: 207147 - 208241 (-)
Gene ID: HRGMv2_3189_2_197
Type: CAZyme
Location: 208225 - 209217 (-)
Type: CAZyme
Location: 208225 - 209217 (-)
Gene ID: HRGMv2_3189_2_198
Type: CAZyme
Location: 209218 - 210198 (-)
Type: CAZyme
Location: 209218 - 210198 (-)
Gene ID: HRGMv2_3189_2_199
Type: CAZyme
Location: 210201 - 211199 (-)
Type: CAZyme
Location: 210201 - 211199 (-)
Gene ID: HRGMv2_3189_2_200
Type: CAZyme
Location: 211229 - 212155 (-)
Type: CAZyme
Location: 211229 - 212155 (-)
Gene ID: HRGMv2_3189_2_201
Type: pfam
Location: 212167 - 213357 (-)
Type: pfam
Location: 212167 - 213357 (-)
Gene ID: HRGMv2_3189_2_202
Type: CAZyme
Location: 213376 - 214362 (-)
Type: CAZyme
Location: 213376 - 214362 (-)
Gene ID: HRGMv2_3189_2_203
Type: CAZyme
Location: 214366 - 215439 (-)
Type: CAZyme
Location: 214366 - 215439 (-)
Gene ID: HRGMv2_3189_2_204
Type: CAZyme
Location: 215436 - 216578 (-)
Type: CAZyme
Location: 215436 - 216578 (-)
Gene ID: HRGMv2_3189_2_205
Type: pfam
Location: 216599 - 217516 (-)
Type: pfam
Location: 216599 - 217516 (-)
Gene ID: HRGMv2_3189_2_206
Type: pfam
Location: 217530 - 218381 (-)
Type: pfam
Location: 217530 - 218381 (-)
Gene ID: HRGMv2_3189_2_207
Type: TC
Location: 218413 - 219357 (-)
Type: TC
Location: 218413 - 219357 (-)
Gene ID: HRGMv2_3189_2_208
Type: TC
Location: 219362 - 220069 (-)
Type: TC
Location: 219362 - 220069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900547915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.