Cluster: HRGMv2_3189_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3189
- CGC Family ID: CGCFAM_04474
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_172 | 180137 | 180901 | + | 3.A.1.134.4 |
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_173 | 180898 | 182922 | + | 3.A.1.134.4 |
| NULL(UNKNOWN) | HRGMv2_3189_2 | HRGMv2_3189_2_174 | 183195 | 183575 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3189_2 | HRGMv2_3189_2_175 | 184190 | 186583 | + | GH51_2 |
| pfam | HRGMv2_3189_2 | HRGMv2_3189_2_176 | 186584 | 187468 | + | Exo_endo_phos |
| TC | HRGMv2_3189_2 | HRGMv2_3189_2_177 | 187677 | 188459 | + | 2.A.5.5.2 |
Gene ID: HRGMv2_3189_2_172
Type: TC
Location: 180137 - 180901 (+)
Type: TC
Location: 180137 - 180901 (+)
Gene ID: HRGMv2_3189_2_173
Type: TC
Location: 180898 - 182922 (+)
Type: TC
Location: 180898 - 182922 (+)
Gene ID: HRGMv2_3189_2_174
Type:
Location: 183195 - 183575 (+)
Type:
Location: 183195 - 183575 (+)
Gene ID: HRGMv2_3189_2_175
Type: CAZyme
Location: 184190 - 186583 (+)
Type: CAZyme
Location: 184190 - 186583 (+)
Gene ID: HRGMv2_3189_2_176
Type: pfam
Location: 186584 - 187468 (+)
Type: pfam
Location: 186584 - 187468 (+)
Gene ID: HRGMv2_3189_2_177
Type: TC
Location: 187677 - 188459 (+)
Type: TC
Location: 187677 - 188459 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900547915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.