Cluster: HRGMv2_3189_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3189
- CGC Family ID: CGCFAM_00374
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3189_1 | HRGMv2_3189_1_124 | 127090 | 127863 | - | 3.A.1.34.1 |
| TC | HRGMv2_3189_1 | HRGMv2_3189_1_125 | 127856 | 128773 | - | 3.A.1.34.1 |
| CAZyme | HRGMv2_3189_1 | HRGMv2_3189_1_126 | 129119 | 131167 | + | GT2 | GT8 |
| CAZyme | HRGMv2_3189_1 | HRGMv2_3189_1_127 | 131258 | 133252 | + | GT2 | GT8 |
Gene ID: HRGMv2_3189_1_124
Type: TC
Location: 127090 - 127863 (-)
Type: TC
Location: 127090 - 127863 (-)
Gene ID: HRGMv2_3189_1_125
Type: TC
Location: 127856 - 128773 (-)
Type: TC
Location: 127856 - 128773 (-)
Gene ID: HRGMv2_3189_1_126
Type: CAZyme
Location: 129119 - 131167 (+)
Type: CAZyme
Location: 129119 - 131167 (+)
Gene ID: HRGMv2_3189_1_127
Type: CAZyme
Location: 131258 - 133252 (+)
Type: CAZyme
Location: 131258 - 133252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900547915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.