Cluster: HRGMv2_3187_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_10152
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3187_5 | HRGMv2_3187_5_47 | 45225 | 46517 | + | 9.A.40.2.1 |
| pfam | HRGMv2_3187_5 | HRGMv2_3187_5_48 | 46534 | 47031 | + | CinA |
| TF | HRGMv2_3187_5 | HRGMv2_3187_5_49 | 47009 | 47233 | + | PspC |
| TC | HRGMv2_3187_5 | HRGMv2_3187_5_50 | 47475 | 48950 | - | 2.A.22.5.3 |
| STP | HRGMv2_3187_5 | HRGMv2_3187_5_51 | 49112 | 49606 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_3187_5 | HRGMv2_3187_5_52 | 49599 | 50600 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3187_5 | HRGMv2_3187_5_53 | 50662 | 52659 | - | GH18 |
Gene ID: HRGMv2_3187_5_47
Type: TC
Location: 45225 - 46517 (+)
Type: TC
Location: 45225 - 46517 (+)
Gene ID: HRGMv2_3187_5_48
Type: pfam
Location: 46534 - 47031 (+)
Type: pfam
Location: 46534 - 47031 (+)
Gene ID: HRGMv2_3187_5_49
Type: TF
Location: 47009 - 47233 (+)
Type: TF
Location: 47009 - 47233 (+)
Gene ID: HRGMv2_3187_5_50
Type: TC
Location: 47475 - 48950 (-)
Type: TC
Location: 47475 - 48950 (-)
Gene ID: HRGMv2_3187_5_51
Type: STP
Location: 49112 - 49606 (+)
Type: STP
Location: 49112 - 49606 (+)
Gene ID: HRGMv2_3187_5_52
Type:
Location: 49599 - 50600 (+)
Type:
Location: 49599 - 50600 (+)
Gene ID: HRGMv2_3187_5_53
Type: CAZyme
Location: 50662 - 52659 (-)
Type: CAZyme
Location: 50662 - 52659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.