Cluster: HRGMv2_3187_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_00909
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3187_4 | HRGMv2_3187_4_36 | 40459 | 41736 | - | 9.A.40.2.2 |
| pfam | HRGMv2_3187_4 | HRGMv2_3187_4_37 | 41826 | 43253 | - | Radical_SAM |
| CAZyme | HRGMv2_3187_4 | HRGMv2_3187_4_38 | 43360 | 46419 | - | GH2 |
| TC | HRGMv2_3187_4 | HRGMv2_3187_4_39 | 46444 | 47061 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_3187_4 | HRGMv2_3187_4_40 | 47244 | 47837 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3187_4 | HRGMv2_3187_4_41 | 47914 | 50655 | + | 3.A.5.1.3 |
| TC | HRGMv2_3187_4 | HRGMv2_3187_4_42 | 50814 | 51497 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_3187_4_36
Type: TC
Location: 40459 - 41736 (-)
Type: TC
Location: 40459 - 41736 (-)
Gene ID: HRGMv2_3187_4_37
Type: pfam
Location: 41826 - 43253 (-)
Type: pfam
Location: 41826 - 43253 (-)
Gene ID: HRGMv2_3187_4_38
Type: CAZyme
Location: 43360 - 46419 (-)
Type: CAZyme
Location: 43360 - 46419 (-)
Gene ID: HRGMv2_3187_4_39
Type: TC
Location: 46444 - 47061 (-)
Type: TC
Location: 46444 - 47061 (-)
Gene ID: HRGMv2_3187_4_40
Type:
Location: 47244 - 47837 (+)
Type:
Location: 47244 - 47837 (+)
Gene ID: HRGMv2_3187_4_41
Type: TC
Location: 47914 - 50655 (+)
Type: TC
Location: 47914 - 50655 (+)
Gene ID: HRGMv2_3187_4_42
Type: TC
Location: 50814 - 51497 (+)
Type: TC
Location: 50814 - 51497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.