Cluster: HRGMv2_3187_CGC25
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_132 | 134364 | 135194 | + | GT2 |
| pfam | HRGMv2_3187_10 | HRGMv2_3187_10_133 | 135225 | 136388 | + | EpsG |
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_134 | 136385 | 137497 | + | GT4 |
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_135 | 137500 | 138561 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_3187_10 | HRGMv2_3187_10_136 | 138570 | 139790 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3187_10 | HRGMv2_3187_10_137 | 139795 | 140889 | + | Epimerase_2 |
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_138 | 140893 | 141852 | + | GT2 |
| pfam | HRGMv2_3187_10 | HRGMv2_3187_10_139 | 141854 | 142390 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_140 | 142377 | 143414 | + | GT2 |
| pfam | HRGMv2_3187_10 | HRGMv2_3187_10_141 | 143417 | 144562 | + | PS_pyruv_trans |
| pfam | HRGMv2_3187_10 | HRGMv2_3187_10_142 | 144559 | 145710 | + | Glyco_hydro_88 |
| TC | HRGMv2_3187_10 | HRGMv2_3187_10_143 | 145716 | 147251 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_3187_10_132
Type: CAZyme
Location: 134364 - 135194 (+)
Type: CAZyme
Location: 134364 - 135194 (+)
Gene ID: HRGMv2_3187_10_133
Type: pfam
Location: 135225 - 136388 (+)
Type: pfam
Location: 135225 - 136388 (+)
Gene ID: HRGMv2_3187_10_134
Type: CAZyme
Location: 136385 - 137497 (+)
Type: CAZyme
Location: 136385 - 137497 (+)
Gene ID: HRGMv2_3187_10_135
Type: CAZyme
Location: 137500 - 138561 (+)
Type: CAZyme
Location: 137500 - 138561 (+)
Gene ID: HRGMv2_3187_10_136
Type:
Location: 138570 - 139790 (+)
Type:
Location: 138570 - 139790 (+)
Gene ID: HRGMv2_3187_10_137
Type: pfam
Location: 139795 - 140889 (+)
Type: pfam
Location: 139795 - 140889 (+)
Gene ID: HRGMv2_3187_10_138
Type: CAZyme
Location: 140893 - 141852 (+)
Type: CAZyme
Location: 140893 - 141852 (+)
Gene ID: HRGMv2_3187_10_139
Type: pfam
Location: 141854 - 142390 (+)
Type: pfam
Location: 141854 - 142390 (+)
Gene ID: HRGMv2_3187_10_140
Type: CAZyme
Location: 142377 - 143414 (+)
Type: CAZyme
Location: 142377 - 143414 (+)
Gene ID: HRGMv2_3187_10_141
Type: pfam
Location: 143417 - 144562 (+)
Type: pfam
Location: 143417 - 144562 (+)
Gene ID: HRGMv2_3187_10_142
Type: pfam
Location: 144559 - 145710 (+)
Type: pfam
Location: 144559 - 145710 (+)
Gene ID: HRGMv2_3187_10_143
Type: TC
Location: 145716 - 147251 (+)
Type: TC
Location: 145716 - 147251 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.