Cluster: HRGMv2_3187_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_00504
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3187_10 | HRGMv2_3187_10_50 | 44579 | 47113 | + | GH2 |
| TF | HRGMv2_3187_10 | HRGMv2_3187_10_51 | 47186 | 47863 | + | Trans_reg_C |
| STP | HRGMv2_3187_10 | HRGMv2_3187_10_52 | 47856 | 48848 | + | HATPase_c | HisKA |
| TC | HRGMv2_3187_10 | HRGMv2_3187_10_53 | 48943 | 49626 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_3187_10_50
Type: CAZyme
Location: 44579 - 47113 (+)
Type: CAZyme
Location: 44579 - 47113 (+)
Gene ID: HRGMv2_3187_10_51
Type: TF
Location: 47186 - 47863 (+)
Type: TF
Location: 47186 - 47863 (+)
Gene ID: HRGMv2_3187_10_52
Type: STP
Location: 47856 - 48848 (+)
Type: STP
Location: 47856 - 48848 (+)
Gene ID: HRGMv2_3187_10_53
Type: TC
Location: 48943 - 49626 (+)
Type: TC
Location: 48943 - 49626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.