Cluster: HRGMv2_3187_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_191 | 206501 | 208405 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_192 | 208417 | 209625 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_193 | 209628 | 210746 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_194 | 210764 | 212185 | + | GT5 |
| TC | HRGMv2_3187_9 | HRGMv2_3187_9_195 | 212234 | 213169 | - | 1.A.35.3.2 |
Gene ID: HRGMv2_3187_9_191
Type: CAZyme
Location: 206501 - 208405 (+)
Type: CAZyme
Location: 206501 - 208405 (+)
Gene ID: HRGMv2_3187_9_192
Type: pfam
Location: 208417 - 209625 (+)
Type: pfam
Location: 208417 - 209625 (+)
Gene ID: HRGMv2_3187_9_193
Type: pfam
Location: 209628 - 210746 (+)
Type: pfam
Location: 209628 - 210746 (+)
Gene ID: HRGMv2_3187_9_194
Type: CAZyme
Location: 210764 - 212185 (+)
Type: CAZyme
Location: 210764 - 212185 (+)
Gene ID: HRGMv2_3187_9_195
Type: TC
Location: 212234 - 213169 (-)
Type: TC
Location: 212234 - 213169 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.