Cluster: HRGMv2_3187_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_04083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_128 | 143067 | 143864 | + | GT32 |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_129 | 143874 | 145313 | + | Polysacc_synt |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_130 | 145297 | 146514 | + | Glyphos_transf |
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_131 | 146531 | 147565 | + | GT2 |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_132 | 147569 | 148153 | + | VanZ |
| TC | HRGMv2_3187_9 | HRGMv2_3187_9_133 | 148187 | 149275 | - | 2.A.98.1.4 |
Gene ID: HRGMv2_3187_9_128
Type: CAZyme
Location: 143067 - 143864 (+)
Type: CAZyme
Location: 143067 - 143864 (+)
Gene ID: HRGMv2_3187_9_129
Type: pfam
Location: 143874 - 145313 (+)
Type: pfam
Location: 143874 - 145313 (+)
Gene ID: HRGMv2_3187_9_130
Type: pfam
Location: 145297 - 146514 (+)
Type: pfam
Location: 145297 - 146514 (+)
Gene ID: HRGMv2_3187_9_131
Type: CAZyme
Location: 146531 - 147565 (+)
Type: CAZyme
Location: 146531 - 147565 (+)
Gene ID: HRGMv2_3187_9_132
Type: pfam
Location: 147569 - 148153 (+)
Type: pfam
Location: 147569 - 148153 (+)
Gene ID: HRGMv2_3187_9_133
Type: TC
Location: 148187 - 149275 (-)
Type: TC
Location: 148187 - 149275 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.