Cluster: HRGMv2_3187_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3187
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_43 | 42587 | 45595 | - | GH2 |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_44 | 45723 | 46931 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| CAZyme | HRGMv2_3187_9 | HRGMv2_3187_9_45 | 47076 | 48428 | + | GH33 |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_46 | 48565 | 49719 | + | RmuC |
| pfam | HRGMv2_3187_9 | HRGMv2_3187_9_47 | 49774 | 51951 | - | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | HRGMv2_3187_9 | HRGMv2_3187_9_48 | 52053 | 53264 | - | 3.B.1.1.2 |
Gene ID: HRGMv2_3187_9_43
Type: CAZyme
Location: 42587 - 45595 (-)
Type: CAZyme
Location: 42587 - 45595 (-)
Gene ID: HRGMv2_3187_9_44
Type: pfam
Location: 45723 - 46931 (-)
Type: pfam
Location: 45723 - 46931 (-)
Gene ID: HRGMv2_3187_9_45
Type: CAZyme
Location: 47076 - 48428 (+)
Type: CAZyme
Location: 47076 - 48428 (+)
Gene ID: HRGMv2_3187_9_46
Type: pfam
Location: 48565 - 49719 (+)
Type: pfam
Location: 48565 - 49719 (+)
Gene ID: HRGMv2_3187_9_47
Type: pfam
Location: 49774 - 51951 (-)
Type: pfam
Location: 49774 - 51951 (-)
Gene ID: HRGMv2_3187_9_48
Type: TC
Location: 52053 - 53264 (-)
Type: TC
Location: 52053 - 53264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.