Cluster: HRGMv2_3187_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_04082
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3187_6 | HRGMv2_3187_6_115 | 135558 | 137033 | - | 2.A.2.3.6 |
| peptidase | HRGMv2_3187_6 | HRGMv2_3187_6_116 | 137059 | 137709 | - | S26.UPA |
| CAZyme | HRGMv2_3187_6 | HRGMv2_3187_6_117 | 137745 | 140090 | - | GH36 |
| pfam | HRGMv2_3187_6 | HRGMv2_3187_6_118 | 140177 | 140431 | - | TSCPD |
| CAZyme | HRGMv2_3187_6 | HRGMv2_3187_6_119 | 140642 | 141655 | + | GH179 |
Gene ID: HRGMv2_3187_6_115
Type: TC
Location: 135558 - 137033 (-)
Type: TC
Location: 135558 - 137033 (-)
Gene ID: HRGMv2_3187_6_116
Type: peptidase
Location: 137059 - 137709 (-)
Type: peptidase
Location: 137059 - 137709 (-)
Gene ID: HRGMv2_3187_6_117
Type: CAZyme
Location: 137745 - 140090 (-)
Type: CAZyme
Location: 137745 - 140090 (-)
Gene ID: HRGMv2_3187_6_118
Type: pfam
Location: 140177 - 140431 (-)
Type: pfam
Location: 140177 - 140431 (-)
Gene ID: HRGMv2_3187_6_119
Type: CAZyme
Location: 140642 - 141655 (+)
Type: CAZyme
Location: 140642 - 141655 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.