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Cluster: HRGMv2_3187_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3187_6 HRGMv2_3187_6_88 89689 91449 - 2.A.58.2.2
pfam HRGMv2_3187_6 HRGMv2_3187_6_89 91658 92563 + PI-PLC-X
CAZyme HRGMv2_3187_6 HRGMv2_3187_6_90 92560 93417 + GH43_17
CAZyme HRGMv2_3187_6 HRGMv2_3187_6_91 93419 95827 + GH3
NULL(UNKNOWN) HRGMv2_3187_6 HRGMv2_3187_6_92 95979 96323 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3187_6 HRGMv2_3187_6_93 96453 97502 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3187_6 HRGMv2_3187_6_94 97511 99085 - 2.A.50.2.1
pfam HRGMv2_3187_6 HRGMv2_3187_6_95 99089 99319 - PP-binding
TC HRGMv2_3187_6 HRGMv2_3187_6_96 99357 100868 - 4.C.1.1.4
TF HRGMv2_3187_6 HRGMv2_3187_6_97 101160 101414 + 0043707
CAZyme HRGMv2_3187_6 HRGMv2_3187_6_98 101454 103196 - GH27
Gene ID: HRGMv2_3187_6_88
Type: TC
Location: 89689 - 91449 (-)
Gene ID: HRGMv2_3187_6_89
Type: pfam
Location: 91658 - 92563 (+)
Gene ID: HRGMv2_3187_6_90
Type: CAZyme
Location: 92560 - 93417 (+)
Gene ID: HRGMv2_3187_6_91
Type: CAZyme
Location: 93419 - 95827 (+)
Gene ID: HRGMv2_3187_6_92
Type:
Location: 95979 - 96323 (-)
Gene ID: HRGMv2_3187_6_93
Type:
Location: 96453 - 97502 (-)
Gene ID: HRGMv2_3187_6_94
Type: TC
Location: 97511 - 99085 (-)
Gene ID: HRGMv2_3187_6_95
Type: pfam
Location: 99089 - 99319 (-)
Gene ID: HRGMv2_3187_6_96
Type: TC
Location: 99357 - 100868 (-)
Gene ID: HRGMv2_3187_6_97
Type: TF
Location: 101160 - 101414 (+)
Gene ID: HRGMv2_3187_6_98
Type: CAZyme
Location: 101454 - 103196 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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