Cluster: HRGMv2_3187_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3187
- CGC Family ID: CGCFAM_06188
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3187_6 | HRGMv2_3187_6_77 | 78619 | 79089 | + | 3.D.1.6.2 |
| TC | HRGMv2_3187_6 | HRGMv2_3187_6_78 | 79091 | 80836 | + | 3.D.1.5.1 |
| TC | HRGMv2_3187_6 | HRGMv2_3187_6_79 | 80849 | 83065 | + | 3.D.1.5.1 |
| pfam | HRGMv2_3187_6 | HRGMv2_3187_6_80 | 83138 | 83806 | + | cobW |
| pfam | HRGMv2_3187_6 | HRGMv2_3187_6_81 | 83806 | 84144 | + | HypA |
| CAZyme | HRGMv2_3187_6 | HRGMv2_3187_6_82 | 84183 | 85841 | - | GH13_31 |
Gene ID: HRGMv2_3187_6_77
Type: TC
Location: 78619 - 79089 (+)
Type: TC
Location: 78619 - 79089 (+)
Gene ID: HRGMv2_3187_6_78
Type: TC
Location: 79091 - 80836 (+)
Type: TC
Location: 79091 - 80836 (+)
Gene ID: HRGMv2_3187_6_79
Type: TC
Location: 80849 - 83065 (+)
Type: TC
Location: 80849 - 83065 (+)
Gene ID: HRGMv2_3187_6_80
Type: pfam
Location: 83138 - 83806 (+)
Type: pfam
Location: 83138 - 83806 (+)
Gene ID: HRGMv2_3187_6_81
Type: pfam
Location: 83806 - 84144 (+)
Type: pfam
Location: 83806 - 84144 (+)
Gene ID: HRGMv2_3187_6_82
Type: CAZyme
Location: 84183 - 85841 (-)
Type: CAZyme
Location: 84183 - 85841 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp021770095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.