Cluster: HRGMv2_3186_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3186
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3186_34 | HRGMv2_3186_34_25 | 36035 | 37258 | + | GH3 |
| TC | HRGMv2_3186_34 | HRGMv2_3186_34_26 | 37670 | 40267 | + | 3.A.9.1.2 |
| pfam | HRGMv2_3186_34 | HRGMv2_3186_34_27 | 40292 | 41002 | - | DUF1638 |
| pfam | HRGMv2_3186_34 | HRGMv2_3186_34_28 | 41537 | 44461 | - | SLH | SLH | SLH | YDG |
| TC | HRGMv2_3186_34 | HRGMv2_3186_34_29 | 44672 | 46267 | - | 3.A.1.147.6 |
| TC | HRGMv2_3186_34 | HRGMv2_3186_34_30 | 46261 | 46974 | - | 3.A.1.147.6 |
Gene ID: HRGMv2_3186_34_25
Type: CAZyme
Location: 36035 - 37258 (+)
Type: CAZyme
Location: 36035 - 37258 (+)
Gene ID: HRGMv2_3186_34_26
Type: TC
Location: 37670 - 40267 (+)
Type: TC
Location: 37670 - 40267 (+)
Gene ID: HRGMv2_3186_34_27
Type: pfam
Location: 40292 - 41002 (-)
Type: pfam
Location: 40292 - 41002 (-)
Gene ID: HRGMv2_3186_34_28
Type: pfam
Location: 41537 - 44461 (-)
Type: pfam
Location: 41537 - 44461 (-)
Gene ID: HRGMv2_3186_34_29
Type: TC
Location: 44672 - 46267 (-)
Type: TC
Location: 44672 - 46267 (-)
Gene ID: HRGMv2_3186_34_30
Type: TC
Location: 46261 - 46974 (-)
Type: TC
Location: 46261 - 46974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp958436045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3186_34_29 | vegetarian > vegan | 1.09419 | 0.00229 |
| HRGMv2_3186_34_30 | vegetarian > vegan | 1.18894 | 0.00229 |