Cluster: HRGMv2_3186_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3186
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3186_30 | HRGMv2_3186_30_9 | 10515 | 11237 | - | GT26 |
| NULL(UNKNOWN) | HRGMv2_3186_30 | HRGMv2_3186_30_10 | 11405 | 12250 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3186_30 | HRGMv2_3186_30_11 | 12406 | 13149 | + | Abhydrolase_1 | Abhydrolase_6 |
| TC | HRGMv2_3186_30 | HRGMv2_3186_30_12 | 13169 | 14488 | - | 2.A.1.17.3 |
| TC | HRGMv2_3186_30 | HRGMv2_3186_30_13 | 14792 | 15973 | - | 2.A.1.17.3 |
Gene ID: HRGMv2_3186_30_9
Type: CAZyme
Location: 10515 - 11237 (-)
Type: CAZyme
Location: 10515 - 11237 (-)
Gene ID: HRGMv2_3186_30_10
Type:
Location: 11405 - 12250 (+)
Type:
Location: 11405 - 12250 (+)
Gene ID: HRGMv2_3186_30_11
Type: pfam
Location: 12406 - 13149 (+)
Type: pfam
Location: 12406 - 13149 (+)
Gene ID: HRGMv2_3186_30_12
Type: TC
Location: 13169 - 14488 (-)
Type: TC
Location: 13169 - 14488 (-)
Gene ID: HRGMv2_3186_30_13
Type: TC
Location: 14792 - 15973 (-)
Type: TC
Location: 14792 - 15973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp958436045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3186_30_10 | vegetarian > vegan | 2.03954 | 0.00229 |
| HRGMv2_3186_30_12 | vegetarian > vegan | 1.45375 | 0.00229 |
| HRGMv2_3186_30_13 | vegetarian > vegan | 1.07811 | 0.00229 |