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Cluster: HRGMv2_3183_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3183_3 HRGMv2_3183_3_105 104545 105390 - 3.A.1.15.13
TC HRGMv2_3183_3 HRGMv2_3183_3_106 105387 106172 - 3.A.1.15.15
TC HRGMv2_3183_3 HRGMv2_3183_3_107 106169 107113 - 3.A.1.15.15
TC HRGMv2_3183_3 HRGMv2_3183_3_108 107293 109416 - 3.A.10.1.13
TC HRGMv2_3183_3 HRGMv2_3183_3_109 109620 111056 - 2.A.38.1.1
TC HRGMv2_3183_3 HRGMv2_3183_3_110 111186 112550 - 2.A.38.1.1
TC HRGMv2_3183_3 HRGMv2_3183_3_111 112774 114117 + 2.A.66.1.4
NULL(UNKNOWN) HRGMv2_3183_3 HRGMv2_3183_3_112 114254 114394 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3183_3 HRGMv2_3183_3_113 114537 115412 + Rgg_C
CAZyme HRGMv2_3183_3 HRGMv2_3183_3_114 115528 117381 - CE4
Gene ID: HRGMv2_3183_3_105
Type: TC
Location: 104545 - 105390 (-)
Gene ID: HRGMv2_3183_3_106
Type: TC
Location: 105387 - 106172 (-)
Gene ID: HRGMv2_3183_3_107
Type: TC
Location: 106169 - 107113 (-)
Gene ID: HRGMv2_3183_3_108
Type: TC
Location: 107293 - 109416 (-)
Gene ID: HRGMv2_3183_3_109
Type: TC
Location: 109620 - 111056 (-)
Gene ID: HRGMv2_3183_3_110
Type: TC
Location: 111186 - 112550 (-)
Gene ID: HRGMv2_3183_3_111
Type: TC
Location: 112774 - 114117 (+)
Gene ID: HRGMv2_3183_3_112
Type:
Location: 114254 - 114394 (-)
Gene ID: HRGMv2_3183_3_113
Type: pfam
Location: 114537 - 115412 (+)
Gene ID: HRGMv2_3183_3_114
Type: CAZyme
Location: 115528 - 117381 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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