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Cluster: HRGMv2_3183_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3183_3 HRGMv2_3183_3_47 44510 45382 + 3.A.1.7.5
TC HRGMv2_3183_3 HRGMv2_3183_3_48 45491 46438 + 3.A.1.7.5
TC HRGMv2_3183_3 HRGMv2_3183_3_49 46441 47295 + 3.A.1.7.5
TC HRGMv2_3183_3 HRGMv2_3183_3_50 47299 48087 + 3.A.1.7.5
pfam HRGMv2_3183_3 HRGMv2_3183_3_51 48087 48779 + PhoU | PhoU
TC HRGMv2_3183_3 HRGMv2_3183_3_52 48889 50637 + 2.A.58.2.2
NULL(UNKNOWN) HRGMv2_3183_3 HRGMv2_3183_3_53 50931 51758 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3183_3 HRGMv2_3183_3_54 51841 52917 + GT2
Gene ID: HRGMv2_3183_3_47
Type: TC
Location: 44510 - 45382 (+)
Gene ID: HRGMv2_3183_3_48
Type: TC
Location: 45491 - 46438 (+)
Gene ID: HRGMv2_3183_3_49
Type: TC
Location: 46441 - 47295 (+)
Gene ID: HRGMv2_3183_3_50
Type: TC
Location: 47299 - 48087 (+)
Gene ID: HRGMv2_3183_3_51
Type: pfam
Location: 48087 - 48779 (+)
Gene ID: HRGMv2_3183_3_52
Type: TC
Location: 48889 - 50637 (+)
Gene ID: HRGMv2_3183_3_53
Type:
Location: 50931 - 51758 (+)
Gene ID: HRGMv2_3183_3_54
Type: CAZyme
Location: 51841 - 52917 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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