Cluster: HRGMv2_3183_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3183
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3183_2 | HRGMv2_3183_2_37 | 38336 | 39757 | - | 2.A.25.1.5 |
| pfam | HRGMv2_3183_2 | HRGMv2_3183_2_38 | 39949 | 41424 | - | AA_permease | AA_permease_2 |
| TF | HRGMv2_3183_2 | HRGMv2_3183_2_39 | 42063 | 42965 | + | HTH_1 |
| CAZyme | HRGMv2_3183_2 | HRGMv2_3183_2_40 | 43202 | 44005 | - | CE4 |
| pfam | HRGMv2_3183_2 | HRGMv2_3183_2_41 | 44340 | 45800 | + | NAPRTase_N | NAPRTase_C |
| TF | HRGMv2_3183_2 | HRGMv2_3183_2_42 | 45826 | 46335 | + | HTH_11 |
| TC | HRGMv2_3183_2 | HRGMv2_3183_2_43 | 46449 | 47555 | + | 9.A.23.1.1 |
Gene ID: HRGMv2_3183_2_37
Type: TC
Location: 38336 - 39757 (-)
Type: TC
Location: 38336 - 39757 (-)
Gene ID: HRGMv2_3183_2_38
Type: pfam
Location: 39949 - 41424 (-)
Type: pfam
Location: 39949 - 41424 (-)
Gene ID: HRGMv2_3183_2_39
Type: TF
Location: 42063 - 42965 (+)
Type: TF
Location: 42063 - 42965 (+)
Gene ID: HRGMv2_3183_2_40
Type: CAZyme
Location: 43202 - 44005 (-)
Type: CAZyme
Location: 43202 - 44005 (-)
Gene ID: HRGMv2_3183_2_41
Type: pfam
Location: 44340 - 45800 (+)
Type: pfam
Location: 44340 - 45800 (+)
Gene ID: HRGMv2_3183_2_42
Type: TF
Location: 45826 - 46335 (+)
Type: TF
Location: 45826 - 46335 (+)
Gene ID: HRGMv2_3183_2_43
Type: TC
Location: 46449 - 47555 (+)
Type: TC
Location: 46449 - 47555 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Species
Evtepia sp004554585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3183_2_41 | vegetarian > vegan | 1.04216 | 0.00229 |