Cluster: HRGMv2_3182_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3182
- CGC Family ID: CGCFAM_00597
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3182_65 | HRGMv2_3182_65_2 | 1176 | 2579 | + | GT2 | GT2 |
| NULL(UNKNOWN) | HRGMv2_3182_65 | HRGMv2_3182_65_3 | 2601 | 3092 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3182_65 | HRGMv2_3182_65_4 | 3089 | 4939 | + | EAL |
| TC | HRGMv2_3182_65 | HRGMv2_3182_65_5 | 4962 | 6062 | + | 8.A.59.4.2 |
Gene ID: HRGMv2_3182_65_2
Type: CAZyme
Location: 1176 - 2579 (+)
Type: CAZyme
Location: 1176 - 2579 (+)
Gene ID: HRGMv2_3182_65_3
Type:
Location: 2601 - 3092 (+)
Type:
Location: 2601 - 3092 (+)
Gene ID: HRGMv2_3182_65_4
Type: STP
Location: 3089 - 4939 (+)
Type: STP
Location: 3089 - 4939 (+)
Gene ID: HRGMv2_3182_65_5
Type: TC
Location: 4962 - 6062 (+)
Type: TC
Location: 4962 - 6062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Pseudobutyricicoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.