Cluster: HRGMv2_3182_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3182
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3182_29 | HRGMv2_3182_29_25 | 29089 | 30783 | - | GH18 |
| sulfatase | HRGMv2_3182_29 | HRGMv2_3182_29_26 | 30948 | 31967 | + | S1_16 |
| TC | HRGMv2_3182_29 | HRGMv2_3182_29_27 | 32103 | 33242 | + | 3.B.1.1.5 |
Gene ID: HRGMv2_3182_29_25
Type: CAZyme
Location: 29089 - 30783 (-)
Type: CAZyme
Location: 29089 - 30783 (-)
Gene ID: HRGMv2_3182_29_26
Type: sulfatase
Location: 30948 - 31967 (+)
Type: sulfatase
Location: 30948 - 31967 (+)
Gene ID: HRGMv2_3182_29_27
Type: TC
Location: 32103 - 33242 (+)
Type: TC
Location: 32103 - 33242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Pseudobutyricicoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.