Cluster: HRGMv2_3182_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3182
- CGC Family ID: CGCFAM_00267
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3182_2 | HRGMv2_3182_2_68 | 78122 | 78787 | - | 3.A.1.122.14 |
| CAZyme | HRGMv2_3182_2 | HRGMv2_3182_2_69 | 79026 | 80102 | - | GT28 |
| pfam | HRGMv2_3182_2 | HRGMv2_3182_2_70 | 80207 | 82825 | - | FtsX | FtsX | MacB_PCD |
| TC | HRGMv2_3182_2 | HRGMv2_3182_2_71 | 82822 | 83505 | - | 3.A.1.125.3 |
Gene ID: HRGMv2_3182_2_68
Type: TC
Location: 78122 - 78787 (-)
Type: TC
Location: 78122 - 78787 (-)
Gene ID: HRGMv2_3182_2_69
Type: CAZyme
Location: 79026 - 80102 (-)
Type: CAZyme
Location: 79026 - 80102 (-)
Gene ID: HRGMv2_3182_2_70
Type: pfam
Location: 80207 - 82825 (-)
Type: pfam
Location: 80207 - 82825 (-)
Gene ID: HRGMv2_3182_2_71
Type: TC
Location: 82822 - 83505 (-)
Type: TC
Location: 82822 - 83505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Pseudobutyricicoccus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.