Cluster: HRGMv2_3179_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3179
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3179_65 | HRGMv2_3179_65_8 | 5868 | 6590 | - | GT26 |
| pfam | HRGMv2_3179_65 | HRGMv2_3179_65_9 | 6834 | 7847 | + | ABC_sub_bind |
| TC | HRGMv2_3179_65 | HRGMv2_3179_65_10 | 7937 | 8860 | + | 3.A.1.34.1 |
| TC | HRGMv2_3179_65 | HRGMv2_3179_65_11 | 8853 | 9647 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_3179_65_8
Type: CAZyme
Location: 5868 - 6590 (-)
Type: CAZyme
Location: 5868 - 6590 (-)
Gene ID: HRGMv2_3179_65_9
Type: pfam
Location: 6834 - 7847 (+)
Type: pfam
Location: 6834 - 7847 (+)
Gene ID: HRGMv2_3179_65_10
Type: TC
Location: 7937 - 8860 (+)
Type: TC
Location: 7937 - 8860 (+)
Gene ID: HRGMv2_3179_65_11
Type: TC
Location: 8853 - 9647 (+)
Type: TC
Location: 8853 - 9647 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.