Cluster: HRGMv2_3179_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3179
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3179_12 | HRGMv2_3179_12_19 | 16981 | 17973 | + | 9.B.146.1.6 |
| TC | HRGMv2_3179_12 | HRGMv2_3179_12_20 | 18019 | 19239 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_3179_12 | HRGMv2_3179_12_21 | 19282 | 20406 | + | GT28 |
Gene ID: HRGMv2_3179_12_19
Type: TC
Location: 16981 - 17973 (+)
Type: TC
Location: 16981 - 17973 (+)
Gene ID: HRGMv2_3179_12_20
Type: TC
Location: 18019 - 19239 (+)
Type: TC
Location: 18019 - 19239 (+)
Gene ID: HRGMv2_3179_12_21
Type: CAZyme
Location: 19282 - 20406 (+)
Type: CAZyme
Location: 19282 - 20406 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.