Cluster: HRGMv2_3179_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3179
- CGC Family ID: CGCFAM_03715
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3179_148 | HRGMv2_3179_148_1 | 2 | 2323 | - | 3.A.3.23.2 |
| STP | HRGMv2_3179_148 | HRGMv2_3179_148_2 | 2499 | 4013 | - | Fer4 | Fer4 |
| CAZyme | HRGMv2_3179_148 | HRGMv2_3179_148_3 | 4230 | 5516 | - | GH18 |
Gene ID: HRGMv2_3179_148_1
Type: TC
Location: 2 - 2323 (-)
Type: TC
Location: 2 - 2323 (-)
Gene ID: HRGMv2_3179_148_2
Type: STP
Location: 2499 - 4013 (-)
Type: STP
Location: 2499 - 4013 (-)
Gene ID: HRGMv2_3179_148_3
Type: CAZyme
Location: 4230 - 5516 (-)
Type: CAZyme
Location: 4230 - 5516 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pseudoflavonifractor_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.