Cluster: HRGMv2_3173_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3173
- CGC Family ID: CGCFAM_00245
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3173_5 | HRGMv2_3173_5_25 | 26063 | 26776 | - | 3.A.1.132.6 |
| TF | HRGMv2_3173_5 | HRGMv2_3173_5_26 | 26776 | 27138 | - | GntR |
| TC | HRGMv2_3173_5 | HRGMv2_3173_5_27 | 27358 | 28152 | - | 3.A.1.34.1 |
| TC | HRGMv2_3173_5 | HRGMv2_3173_5_28 | 28145 | 29062 | - | 3.A.1.34.1 |
| pfam | HRGMv2_3173_5 | HRGMv2_3173_5_29 | 29064 | 30038 | - | ABC_sub_bind |
| pfam | HRGMv2_3173_5 | HRGMv2_3173_5_30 | 30295 | 31290 | - | ATPgrasp_ST |
| CAZyme | HRGMv2_3173_5 | HRGMv2_3173_5_31 | 31411 | 33126 | + | GH36 |
Gene ID: HRGMv2_3173_5_25
Type: TC
Location: 26063 - 26776 (-)
Type: TC
Location: 26063 - 26776 (-)
Gene ID: HRGMv2_3173_5_26
Type: TF
Location: 26776 - 27138 (-)
Type: TF
Location: 26776 - 27138 (-)
Gene ID: HRGMv2_3173_5_27
Type: TC
Location: 27358 - 28152 (-)
Type: TC
Location: 27358 - 28152 (-)
Gene ID: HRGMv2_3173_5_28
Type: TC
Location: 28145 - 29062 (-)
Type: TC
Location: 28145 - 29062 (-)
Gene ID: HRGMv2_3173_5_29
Type: pfam
Location: 29064 - 30038 (-)
Type: pfam
Location: 29064 - 30038 (-)
Gene ID: HRGMv2_3173_5_30
Type: pfam
Location: 30295 - 31290 (-)
Type: pfam
Location: 30295 - 31290 (-)
Gene ID: HRGMv2_3173_5_31
Type: CAZyme
Location: 31411 - 33126 (+)
Type: CAZyme
Location: 31411 - 33126 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
RGIG9041
Species
RGIG9041 sp902492505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.