Cluster: HRGMv2_3173_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3173
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_407 | 463158 | 464510 | - | 2.A.66.1.33 |
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_408 | 464567 | 465598 | - | 2.A.66.1.37 |
| TF | HRGMv2_3173_1 | HRGMv2_3173_1_409 | 465601 | 466038 | - | 0040266 |
| STP | HRGMv2_3173_1 | HRGMv2_3173_1_410 | 466164 | 467717 | - | HD |
| CAZyme | HRGMv2_3173_1 | HRGMv2_3173_1_411 | 467889 | 469373 | - | GH20 |
| pfam | HRGMv2_3173_1 | HRGMv2_3173_1_412 | 469514 | 470350 | + | BacA |
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_413 | 470367 | 472835 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_3173_1_407
Type: TC
Location: 463158 - 464510 (-)
Type: TC
Location: 463158 - 464510 (-)
Gene ID: HRGMv2_3173_1_408
Type: TC
Location: 464567 - 465598 (-)
Type: TC
Location: 464567 - 465598 (-)
Gene ID: HRGMv2_3173_1_409
Type: TF
Location: 465601 - 466038 (-)
Type: TF
Location: 465601 - 466038 (-)
Gene ID: HRGMv2_3173_1_410
Type: STP
Location: 466164 - 467717 (-)
Type: STP
Location: 466164 - 467717 (-)
Gene ID: HRGMv2_3173_1_411
Type: CAZyme
Location: 467889 - 469373 (-)
Type: CAZyme
Location: 467889 - 469373 (-)
Gene ID: HRGMv2_3173_1_412
Type: pfam
Location: 469514 - 470350 (+)
Type: pfam
Location: 469514 - 470350 (+)
Gene ID: HRGMv2_3173_1_413
Type: TC
Location: 470367 - 472835 (+)
Type: TC
Location: 470367 - 472835 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
RGIG9041
Species
RGIG9041 sp902492505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.