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Cluster: HRGMv2_3173_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3173_1 HRGMv2_3173_1_50 61518 63899 - GT35
CAZyme HRGMv2_3173_1 HRGMv2_3173_1_51 63990 65408 - GT5
pfam HRGMv2_3173_1 HRGMv2_3173_1_52 65432 66547 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3173_1 HRGMv2_3173_1_53 66562 67773 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3173_1 HRGMv2_3173_1_54 67814 69706 - GH13_9
CAZyme HRGMv2_3173_1 HRGMv2_3173_1_55 69869 71695 + GH13_39
pfam HRGMv2_3173_1 HRGMv2_3173_1_56 71699 72580 + DAGK_cat | YegS_C
pfam HRGMv2_3173_1 HRGMv2_3173_1_57 72621 73910 - PolyA_pol | PolyA_pol_RNAbd
TC HRGMv2_3173_1 HRGMv2_3173_1_58 73910 74692 - 3.A.1.3.15
TC HRGMv2_3173_1 HRGMv2_3173_1_59 74696 75355 - 3.A.1.3.14
Gene ID: HRGMv2_3173_1_50
Type: CAZyme
Location: 61518 - 63899 (-)
Gene ID: HRGMv2_3173_1_51
Type: CAZyme
Location: 63990 - 65408 (-)
Gene ID: HRGMv2_3173_1_52
Type: pfam
Location: 65432 - 66547 (-)
Gene ID: HRGMv2_3173_1_53
Type: pfam
Location: 66562 - 67773 (-)
Gene ID: HRGMv2_3173_1_54
Type: CAZyme
Location: 67814 - 69706 (-)
Gene ID: HRGMv2_3173_1_55
Type: CAZyme
Location: 69869 - 71695 (+)
Gene ID: HRGMv2_3173_1_56
Type: pfam
Location: 71699 - 72580 (+)
Gene ID: HRGMv2_3173_1_57
Type: pfam
Location: 72621 - 73910 (-)
Gene ID: HRGMv2_3173_1_58
Type: TC
Location: 73910 - 74692 (-)
Gene ID: HRGMv2_3173_1_59
Type: TC
Location: 74696 - 75355 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
QAKW01
→
Genus
RGIG9041
→
Species
RGIG9041 sp902492505

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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