Cluster: HRGMv2_3173_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3173
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3173_1 | HRGMv2_3173_1_33 | 39646 | 41640 | + | GH36 |
| pfam | HRGMv2_3173_1 | HRGMv2_3173_1_34 | 41684 | 43483 | - | FAD_binding_2 | GIDA | DAO | Pyr_redox_2 | FAD_oxidored | NAD_binding_8 |
| pfam | HRGMv2_3173_1 | HRGMv2_3173_1_35 | 43480 | 44481 | - | WYL |
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_36 | 44655 | 45683 | + | 9.A.40.2.4 |
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_37 | 45661 | 46941 | + | 9.A.40.2.4 |
| CAZyme | HRGMv2_3173_1 | HRGMv2_3173_1_38 | 47013 | 48374 | - | CE4 |
| TC | HRGMv2_3173_1 | HRGMv2_3173_1_39 | 48543 | 50156 | - | 9.B.160.1.10 |
Gene ID: HRGMv2_3173_1_33
Type: CAZyme
Location: 39646 - 41640 (+)
Type: CAZyme
Location: 39646 - 41640 (+)
Gene ID: HRGMv2_3173_1_34
Type: pfam
Location: 41684 - 43483 (-)
Type: pfam
Location: 41684 - 43483 (-)
Gene ID: HRGMv2_3173_1_35
Type: pfam
Location: 43480 - 44481 (-)
Type: pfam
Location: 43480 - 44481 (-)
Gene ID: HRGMv2_3173_1_36
Type: TC
Location: 44655 - 45683 (+)
Type: TC
Location: 44655 - 45683 (+)
Gene ID: HRGMv2_3173_1_37
Type: TC
Location: 45661 - 46941 (+)
Type: TC
Location: 45661 - 46941 (+)
Gene ID: HRGMv2_3173_1_38
Type: CAZyme
Location: 47013 - 48374 (-)
Type: CAZyme
Location: 47013 - 48374 (-)
Gene ID: HRGMv2_3173_1_39
Type: TC
Location: 48543 - 50156 (-)
Type: TC
Location: 48543 - 50156 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
RGIG9041
Species
RGIG9041 sp902492505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.