Cluster: HRGMv2_3173_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3173
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3173_17 | HRGMv2_3173_17_8 | 13686 | 15956 | - | CBM67 | GH78 |
| pfam | HRGMv2_3173_17 | HRGMv2_3173_17_9 | 15978 | 16754 | - | AP_endonuc_2 |
| NULL(UNKNOWN) | HRGMv2_3173_17 | HRGMv2_3173_17_10 | 16936 | 17055 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3173_17 | HRGMv2_3173_17_11 | 17027 | 17776 | - | 3.A.1.3.25 |
| TC | HRGMv2_3173_17 | HRGMv2_3173_17_12 | 17766 | 18542 | - | 3.A.1.3.2 |
| TC | HRGMv2_3173_17 | HRGMv2_3173_17_13 | 18640 | 19419 | - | 3.A.1.3.27 |
| TC | HRGMv2_3173_17 | HRGMv2_3173_17_14 | 19570 | 20085 | - | 3.A.1.25.3 |
Gene ID: HRGMv2_3173_17_8
Type: CAZyme
Location: 13686 - 15956 (-)
Type: CAZyme
Location: 13686 - 15956 (-)
Gene ID: HRGMv2_3173_17_9
Type: pfam
Location: 15978 - 16754 (-)
Type: pfam
Location: 15978 - 16754 (-)
Gene ID: HRGMv2_3173_17_10
Type:
Location: 16936 - 17055 (+)
Type:
Location: 16936 - 17055 (+)
Gene ID: HRGMv2_3173_17_11
Type: TC
Location: 17027 - 17776 (-)
Type: TC
Location: 17027 - 17776 (-)
Gene ID: HRGMv2_3173_17_12
Type: TC
Location: 17766 - 18542 (-)
Type: TC
Location: 17766 - 18542 (-)
Gene ID: HRGMv2_3173_17_13
Type: TC
Location: 18640 - 19419 (-)
Type: TC
Location: 18640 - 19419 (-)
Gene ID: HRGMv2_3173_17_14
Type: TC
Location: 19570 - 20085 (-)
Type: TC
Location: 19570 - 20085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
RGIG9041
Species
RGIG9041 sp902492505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.