Cluster: HRGMv2_3173_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3173
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3173_12 | HRGMv2_3173_12_20 | 18923 | 20887 | + | GH42 |
| pfam | HRGMv2_3173_12 | HRGMv2_3173_12_21 | 20934 | 21359 | - | DUF188 |
| CAZyme | HRGMv2_3173_12 | HRGMv2_3173_12_22 | 21356 | 23560 | - | GH36 |
| TF | HRGMv2_3173_12 | HRGMv2_3173_12_23 | 23700 | 24359 | + | Crp |
| TC | HRGMv2_3173_12 | HRGMv2_3173_12_24 | 24443 | 25096 | + | 5.A.1.2.7 |
Gene ID: HRGMv2_3173_12_20
Type: CAZyme
Location: 18923 - 20887 (+)
Type: CAZyme
Location: 18923 - 20887 (+)
Gene ID: HRGMv2_3173_12_21
Type: pfam
Location: 20934 - 21359 (-)
Type: pfam
Location: 20934 - 21359 (-)
Gene ID: HRGMv2_3173_12_22
Type: CAZyme
Location: 21356 - 23560 (-)
Type: CAZyme
Location: 21356 - 23560 (-)
Gene ID: HRGMv2_3173_12_23
Type: TF
Location: 23700 - 24359 (+)
Type: TF
Location: 23700 - 24359 (+)
Gene ID: HRGMv2_3173_12_24
Type: TC
Location: 24443 - 25096 (+)
Type: TC
Location: 24443 - 25096 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
QAKW01
Genus
RGIG9041
Species
RGIG9041 sp902492505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.