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Cluster: HRGMv2_3170_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3170_36 HRGMv2_3170_36_13 8351 9739 + 2.A.66.1.32
pfam HRGMv2_3170_36 HRGMv2_3170_36_14 9848 10834 + Lactamase_B
pfam HRGMv2_3170_36 HRGMv2_3170_36_15 10902 12503 - Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_2 | Lactamase_B_6
CAZyme HRGMv2_3170_36 HRGMv2_3170_36_16 12750 14057 + GH13_20
Gene ID: HRGMv2_3170_36_13
Type: TC
Location: 8351 - 9739 (+)
Gene ID: HRGMv2_3170_36_14
Type: pfam
Location: 9848 - 10834 (+)
Gene ID: HRGMv2_3170_36_15
Type: pfam
Location: 10902 - 12503 (-)
Gene ID: HRGMv2_3170_36_16
Type: CAZyme
Location: 12750 - 14057 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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