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Cluster: HRGMv2_3170_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3170_34 HRGMv2_3170_34_6 8137 9714 + 2.A.66.4.7
TC HRGMv2_3170_34 HRGMv2_3170_34_7 9718 11169 + 9.B.67.1.1
CAZyme HRGMv2_3170_34 HRGMv2_3170_34_8 11166 12296 + GT4
pfam HRGMv2_3170_34 HRGMv2_3170_34_9 12283 12786 + DUF4330
pfam HRGMv2_3170_34 HRGMv2_3170_34_10 12783 13301 + DUF4330
CAZyme HRGMv2_3170_34 HRGMv2_3170_34_11 13315 15543 + GT4
Gene ID: HRGMv2_3170_34_6
Type: TC
Location: 8137 - 9714 (+)
Gene ID: HRGMv2_3170_34_7
Type: TC
Location: 9718 - 11169 (+)
Gene ID: HRGMv2_3170_34_8
Type: CAZyme
Location: 11166 - 12296 (+)
Gene ID: HRGMv2_3170_34_9
Type: pfam
Location: 12283 - 12786 (+)
Gene ID: HRGMv2_3170_34_10
Type: pfam
Location: 12783 - 13301 (+)
Gene ID: HRGMv2_3170_34_11
Type: CAZyme
Location: 13315 - 15543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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