Cluster: HRGMv2_3168_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3168
- CGC Family ID: CGCFAM_04579
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3168_9 | HRGMv2_3168_9_30 | 35988 | 36755 | + | 2.A.79.1.4 |
| TC | HRGMv2_3168_9 | HRGMv2_3168_9_31 | 36774 | 37262 | + | 2.A.79.1.5 |
| CAZyme | HRGMv2_3168_9 | HRGMv2_3168_9_32 | 37496 | 38767 | + | GT2 |
| TC | HRGMv2_3168_9 | HRGMv2_3168_9_33 | 39079 | 41055 | + | 3.A.1.5.25 |
Gene ID: HRGMv2_3168_9_30
Type: TC
Location: 35988 - 36755 (+)
Type: TC
Location: 35988 - 36755 (+)
Gene ID: HRGMv2_3168_9_31
Type: TC
Location: 36774 - 37262 (+)
Type: TC
Location: 36774 - 37262 (+)
Gene ID: HRGMv2_3168_9_32
Type: CAZyme
Location: 37496 - 38767 (+)
Type: CAZyme
Location: 37496 - 38767 (+)
Gene ID: HRGMv2_3168_9_33
Type: TC
Location: 39079 - 41055 (+)
Type: TC
Location: 39079 - 41055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp905197685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.