Cluster: HRGMv2_3168_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3168
- CGC Family ID: CGCFAM_02064
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3168_4 | HRGMv2_3168_4_48 | 46699 | 47793 | + | GT4 |
| TC | HRGMv2_3168_4 | HRGMv2_3168_4_49 | 47790 | 48839 | + | 4.D.2.1.7 |
| pfam | HRGMv2_3168_4 | HRGMv2_3168_4_50 | 48962 | 49789 | + | VCA0040-like |
| STP | HRGMv2_3168_4 | HRGMv2_3168_4_51 | 49915 | 50721 | + | SBP_bac_3 |
| TC | HRGMv2_3168_4 | HRGMv2_3168_4_52 | 50851 | 51513 | + | 3.A.1.3.10 |
| TC | HRGMv2_3168_4 | HRGMv2_3168_4_53 | 51527 | 52285 | + | 3.A.1.3.14 |
Gene ID: HRGMv2_3168_4_48
Type: CAZyme
Location: 46699 - 47793 (+)
Type: CAZyme
Location: 46699 - 47793 (+)
Gene ID: HRGMv2_3168_4_49
Type: TC
Location: 47790 - 48839 (+)
Type: TC
Location: 47790 - 48839 (+)
Gene ID: HRGMv2_3168_4_50
Type: pfam
Location: 48962 - 49789 (+)
Type: pfam
Location: 48962 - 49789 (+)
Gene ID: HRGMv2_3168_4_51
Type: STP
Location: 49915 - 50721 (+)
Type: STP
Location: 49915 - 50721 (+)
Gene ID: HRGMv2_3168_4_52
Type: TC
Location: 50851 - 51513 (+)
Type: TC
Location: 50851 - 51513 (+)
Gene ID: HRGMv2_3168_4_53
Type: TC
Location: 51527 - 52285 (+)
Type: TC
Location: 51527 - 52285 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp905197685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.