Cluster: HRGMv2_3168_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3168
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3168_3 | HRGMv2_3168_3_43 | 43884 | 44918 | - | GH18 |
| STP | HRGMv2_3168_3 | HRGMv2_3168_3_44 | 44915 | 45814 | - | HhH-GPD |
| TC | HRGMv2_3168_3 | HRGMv2_3168_3_45 | 45840 | 47744 | - | 3.A.18.1.1 |
| TF | HRGMv2_3168_3 | HRGMv2_3168_3_46 | 48023 | 48406 | + | Pencillinase_R |
| TC | HRGMv2_3168_3 | HRGMv2_3168_3_47 | 48687 | 51548 | - | 3.A.3.5.23 |
Gene ID: HRGMv2_3168_3_43
Type: CAZyme
Location: 43884 - 44918 (-)
Type: CAZyme
Location: 43884 - 44918 (-)
Gene ID: HRGMv2_3168_3_44
Type: STP
Location: 44915 - 45814 (-)
Type: STP
Location: 44915 - 45814 (-)
Gene ID: HRGMv2_3168_3_45
Type: TC
Location: 45840 - 47744 (-)
Type: TC
Location: 45840 - 47744 (-)
Gene ID: HRGMv2_3168_3_46
Type: TF
Location: 48023 - 48406 (+)
Type: TF
Location: 48023 - 48406 (+)
Gene ID: HRGMv2_3168_3_47
Type: TC
Location: 48687 - 51548 (-)
Type: TC
Location: 48687 - 51548 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp905197685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3168_3_46 | omnivore > vegetarian | 20.45319 | 0.02986 |