Cluster: HRGMv2_3168_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3168
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3168_3 | HRGMv2_3168_3_22 | 19511 | 20341 | - | GT8 |
| TF | HRGMv2_3168_3 | HRGMv2_3168_3_23 | 20361 | 21254 | - | HTH_1 |
| TC | HRGMv2_3168_3 | HRGMv2_3168_3_24 | 21393 | 23168 | + | 3.A.1.135.5 |
| TC | HRGMv2_3168_3 | HRGMv2_3168_3_25 | 23171 | 24916 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_3168_3_22
Type: CAZyme
Location: 19511 - 20341 (-)
Type: CAZyme
Location: 19511 - 20341 (-)
Gene ID: HRGMv2_3168_3_23
Type: TF
Location: 20361 - 21254 (-)
Type: TF
Location: 20361 - 21254 (-)
Gene ID: HRGMv2_3168_3_24
Type: TC
Location: 21393 - 23168 (+)
Type: TC
Location: 21393 - 23168 (+)
Gene ID: HRGMv2_3168_3_25
Type: TC
Location: 23171 - 24916 (+)
Type: TC
Location: 23171 - 24916 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp905197685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.