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Cluster: HRGMv2_3168_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3168_72 HRGMv2_3168_72_2 426 1184 + 3.A.1.134.12
pfam HRGMv2_3168_72 HRGMv2_3168_72_3 1181 3307 + FtsX
pfam HRGMv2_3168_72 HRGMv2_3168_72_4 3395 3721 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme HRGMv2_3168_72 HRGMv2_3168_72_5 3873 5018 - CE9
pfam HRGMv2_3168_72 HRGMv2_3168_72_6 5033 5755 - Methyltransf_4
pfam HRGMv2_3168_72 HRGMv2_3168_72_7 5892 7298 - SDH_alpha
TC HRGMv2_3168_72 HRGMv2_3168_72_8 7467 8261 - 3.A.1.34.1
TC HRGMv2_3168_72 HRGMv2_3168_72_9 8236 9078 - 3.A.1.34.1
Gene ID: HRGMv2_3168_72_2
Type: TC
Location: 426 - 1184 (+)
Gene ID: HRGMv2_3168_72_3
Type: pfam
Location: 1181 - 3307 (+)
Gene ID: HRGMv2_3168_72_4
Type: pfam
Location: 3395 - 3721 (-)
Gene ID: HRGMv2_3168_72_5
Type: CAZyme
Location: 3873 - 5018 (-)
Gene ID: HRGMv2_3168_72_6
Type: pfam
Location: 5033 - 5755 (-)
Gene ID: HRGMv2_3168_72_7
Type: pfam
Location: 5892 - 7298 (-)
Gene ID: HRGMv2_3168_72_8
Type: TC
Location: 7467 - 8261 (-)
Gene ID: HRGMv2_3168_72_9
Type: TC
Location: 8236 - 9078 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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