Cluster: HRGMv2_3168_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3168
- CGC Family ID: CGCFAM_03458
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3168_1 | HRGMv2_3168_1_85 | 88375 | 89694 | + | GH29 |
| pfam | HRGMv2_3168_1 | HRGMv2_3168_1_86 | 90066 | 90827 | - | adh_short | KR | adh_short_C2 | SDR |
| NULL(UNKNOWN) | HRGMv2_3168_1 | HRGMv2_3168_1_87 | 91095 | 91580 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3168_1 | HRGMv2_3168_1_88 | 92062 | 94647 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_3168_1_85
Type: CAZyme
Location: 88375 - 89694 (+)
Type: CAZyme
Location: 88375 - 89694 (+)
Gene ID: HRGMv2_3168_1_86
Type: pfam
Location: 90066 - 90827 (-)
Type: pfam
Location: 90066 - 90827 (-)
Gene ID: HRGMv2_3168_1_87
Type:
Location: 91095 - 91580 (-)
Type:
Location: 91095 - 91580 (-)
Gene ID: HRGMv2_3168_1_88
Type: TC
Location: 92062 - 94647 (-)
Type: TC
Location: 92062 - 94647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp905197685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.