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Cluster: HRGMv2_3159_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3159_8 HRGMv2_3159_8_25 19708 21288 - 3.A.1.5.11
TC HRGMv2_3159_8 HRGMv2_3159_8_26 21395 22360 - 3.A.1.5.15
TC HRGMv2_3159_8 HRGMv2_3159_8_27 22353 23339 - 3.A.1.5.15
TC HRGMv2_3159_8 HRGMv2_3159_8_28 23377 24285 - 3.A.1.5.39
TC HRGMv2_3159_8 HRGMv2_3159_8_29 24282 25232 - 3.A.1.5.11
NULL(UNKNOWN) HRGMv2_3159_8 HRGMv2_3159_8_30 25487 26527 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_3159_8 HRGMv2_3159_8_31 26524 27279 + GntR
CAZyme HRGMv2_3159_8 HRGMv2_3159_8_32 27406 28152 - CE14
TC HRGMv2_3159_8 HRGMv2_3159_8_33 28166 29503 - 2.A.2.1.1
pfam HRGMv2_3159_8 HRGMv2_3159_8_34 29526 30455 - BcrAD_BadFG
TC HRGMv2_3159_8 HRGMv2_3159_8_35 30733 32091 + 2.A.66.1.33
pfam HRGMv2_3159_8 HRGMv2_3159_8_36 32594 33706 - CbiZ
TC HRGMv2_3159_8 HRGMv2_3159_8_37 33827 34837 + 3.A.1.14.9
TC HRGMv2_3159_8 HRGMv2_3159_8_38 34834 35856 + 3.A.1.14.9
TC HRGMv2_3159_8 HRGMv2_3159_8_39 35872 36642 + 3.A.1.14.7
NULL(UNKNOWN) HRGMv2_3159_8 HRGMv2_3159_8_40 36710 37285 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3159_8 HRGMv2_3159_8_41 37324 38403 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3159_8 HRGMv2_3159_8_42 38416 40008 - 2.A.50.2.1
Gene ID: HRGMv2_3159_8_25
Type: TC
Location: 19708 - 21288 (-)
Gene ID: HRGMv2_3159_8_26
Type: TC
Location: 21395 - 22360 (-)
Gene ID: HRGMv2_3159_8_27
Type: TC
Location: 22353 - 23339 (-)
Gene ID: HRGMv2_3159_8_28
Type: TC
Location: 23377 - 24285 (-)
Gene ID: HRGMv2_3159_8_29
Type: TC
Location: 24282 - 25232 (-)
Gene ID: HRGMv2_3159_8_30
Type:
Location: 25487 - 26527 (+)
Gene ID: HRGMv2_3159_8_31
Type: TF
Location: 26524 - 27279 (+)
Gene ID: HRGMv2_3159_8_32
Type: CAZyme
Location: 27406 - 28152 (-)
Gene ID: HRGMv2_3159_8_33
Type: TC
Location: 28166 - 29503 (-)
Gene ID: HRGMv2_3159_8_34
Type: pfam
Location: 29526 - 30455 (-)
Gene ID: HRGMv2_3159_8_35
Type: TC
Location: 30733 - 32091 (+)
Gene ID: HRGMv2_3159_8_36
Type: pfam
Location: 32594 - 33706 (-)
Gene ID: HRGMv2_3159_8_37
Type: TC
Location: 33827 - 34837 (+)
Gene ID: HRGMv2_3159_8_38
Type: TC
Location: 34834 - 35856 (+)
Gene ID: HRGMv2_3159_8_39
Type: TC
Location: 35872 - 36642 (+)
Gene ID: HRGMv2_3159_8_40
Type:
Location: 36710 - 37285 (-)
Gene ID: HRGMv2_3159_8_41
Type:
Location: 37324 - 38403 (-)
Gene ID: HRGMv2_3159_8_42
Type: TC
Location: 38416 - 40008 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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