dbCAN Logo

Cluster: HRGMv2_3159_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3159_1 HRGMv2_3159_1_34 34302 35477 + CE9
TF HRGMv2_3159_1 HRGMv2_3159_1_35 35595 36281 + GntR
pfam HRGMv2_3159_1 HRGMv2_3159_1_36 36311 37141 + GFO_IDH_MocA
CAZyme HRGMv2_3159_1 HRGMv2_3159_1_37 37367 39367 - GH65
CAZyme HRGMv2_3159_1 HRGMv2_3159_1_38 39357 41156 - GH125
TF HRGMv2_3159_1 HRGMv2_3159_1_39 41347 42366 + LacI
TC HRGMv2_3159_1 HRGMv2_3159_1_40 42528 43835 + 3.A.1.1.44
TC HRGMv2_3159_1 HRGMv2_3159_1_41 43898 44824 + 3.A.1.1.11
TC HRGMv2_3159_1 HRGMv2_3159_1_42 44814 45641 + 3.A.1.1.36
CAZyme HRGMv2_3159_1 HRGMv2_3159_1_43 45653 47410 + GH31_7
Gene ID: HRGMv2_3159_1_34
Type: CAZyme
Location: 34302 - 35477 (+)
Gene ID: HRGMv2_3159_1_35
Type: TF
Location: 35595 - 36281 (+)
Gene ID: HRGMv2_3159_1_36
Type: pfam
Location: 36311 - 37141 (+)
Gene ID: HRGMv2_3159_1_37
Type: CAZyme
Location: 37367 - 39367 (-)
Gene ID: HRGMv2_3159_1_38
Type: CAZyme
Location: 39357 - 41156 (-)
Gene ID: HRGMv2_3159_1_39
Type: TF
Location: 41347 - 42366 (+)
Gene ID: HRGMv2_3159_1_40
Type: TC
Location: 42528 - 43835 (+)
Gene ID: HRGMv2_3159_1_41
Type: TC
Location: 43898 - 44824 (+)
Gene ID: HRGMv2_3159_1_42
Type: TC
Location: 44814 - 45641 (+)
Gene ID: HRGMv2_3159_1_43
Type: CAZyme
Location: 45653 - 47410 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List