Cluster: HRGMv2_3159_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3159
- CGC Family ID: CGCFAM_03770
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3159_38 | HRGMv2_3159_38_8 | 12630 | 13418 | + | 2.A.5.5.2 |
| STP | HRGMv2_3159_38 | HRGMv2_3159_38_9 | 13470 | 13781 | + | Rhodanese |
| CAZyme | HRGMv2_3159_38 | HRGMv2_3159_38_10 | 13904 | 15211 | + | GH13_20 |
| pfam | HRGMv2_3159_38 | HRGMv2_3159_38_11 | 15301 | 15849 | - | YcxB |
| TC | HRGMv2_3159_38 | HRGMv2_3159_38_12 | 15878 | 17206 | - | 9.B.160.1.10 |
Gene ID: HRGMv2_3159_38_8
Type: TC
Location: 12630 - 13418 (+)
Type: TC
Location: 12630 - 13418 (+)
Gene ID: HRGMv2_3159_38_9
Type: STP
Location: 13470 - 13781 (+)
Type: STP
Location: 13470 - 13781 (+)
Gene ID: HRGMv2_3159_38_10
Type: CAZyme
Location: 13904 - 15211 (+)
Type: CAZyme
Location: 13904 - 15211 (+)
Gene ID: HRGMv2_3159_38_11
Type: pfam
Location: 15301 - 15849 (-)
Type: pfam
Location: 15301 - 15849 (-)
Gene ID: HRGMv2_3159_38_12
Type: TC
Location: 15878 - 17206 (-)
Type: TC
Location: 15878 - 17206 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp900549475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.