Cluster: HRGMv2_3159_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3159
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3159_31 | HRGMv2_3159_31_20 | 18843 | 19499 | - | 9.B.149.1.11 |
| pfam | HRGMv2_3159_31 | HRGMv2_3159_31_21 | 19765 | 20469 | + | VTT_dom |
| CAZyme | HRGMv2_3159_31 | HRGMv2_3159_31_22 | 20466 | 21722 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3159_31 | HRGMv2_3159_31_23 | 21849 | 22559 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_3159_31 | HRGMv2_3159_31_24 | 22580 | 23239 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3159_31 | HRGMv2_3159_31_25 | 23229 | 24110 | - | 3.A.1.132.6 |
Gene ID: HRGMv2_3159_31_20
Type: TC
Location: 18843 - 19499 (-)
Type: TC
Location: 18843 - 19499 (-)
Gene ID: HRGMv2_3159_31_21
Type: pfam
Location: 19765 - 20469 (+)
Type: pfam
Location: 19765 - 20469 (+)
Gene ID: HRGMv2_3159_31_22
Type: CAZyme
Location: 20466 - 21722 (+)
Type: CAZyme
Location: 20466 - 21722 (+)
Gene ID: HRGMv2_3159_31_23
Type:
Location: 21849 - 22559 (-)
Type:
Location: 21849 - 22559 (-)
Gene ID: HRGMv2_3159_31_24
Type:
Location: 22580 - 23239 (-)
Type:
Location: 22580 - 23239 (-)
Gene ID: HRGMv2_3159_31_25
Type: TC
Location: 23229 - 24110 (-)
Type: TC
Location: 23229 - 24110 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp900549475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3159_31_25 | vegetarian > vegan | 1.68802 | 0.00701 |