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Cluster: HRGMv2_3159_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3159_27 HRGMv2_3159_27_9 13043 14218 + 3.A.1.1.26
sulfatase HRGMv2_3159_27 HRGMv2_3159_27_10 14600 15388 - S1_9
TC HRGMv2_3159_27 HRGMv2_3159_27_11 15923 16546 - 9.B.28.1.2
TC HRGMv2_3159_27 HRGMv2_3159_27_12 16530 17921 - 2.A.66.1.33
TF HRGMv2_3159_27 HRGMv2_3159_27_13 18303 19301 + LacI
STP HRGMv2_3159_27 HRGMv2_3159_27_14 19353 20636 + SBP_bac_1
TC HRGMv2_3159_27 HRGMv2_3159_27_15 20814 21725 + 3.A.1.1.11
TC HRGMv2_3159_27 HRGMv2_3159_27_16 21743 22591 + 3.A.1.1.20
pfam HRGMv2_3159_27 HRGMv2_3159_27_17 22626 23681 + Amidohydro_2
CAZyme HRGMv2_3159_27 HRGMv2_3159_27_18 23703 25091 + GH4
Gene ID: HRGMv2_3159_27_9
Type: TC
Location: 13043 - 14218 (+)
Gene ID: HRGMv2_3159_27_10
Type: sulfatase
Location: 14600 - 15388 (-)
Gene ID: HRGMv2_3159_27_11
Type: TC
Location: 15923 - 16546 (-)
Gene ID: HRGMv2_3159_27_12
Type: TC
Location: 16530 - 17921 (-)
Gene ID: HRGMv2_3159_27_13
Type: TF
Location: 18303 - 19301 (+)
Gene ID: HRGMv2_3159_27_14
Type: STP
Location: 19353 - 20636 (+)
Gene ID: HRGMv2_3159_27_15
Type: TC
Location: 20814 - 21725 (+)
Gene ID: HRGMv2_3159_27_16
Type: TC
Location: 21743 - 22591 (+)
Gene ID: HRGMv2_3159_27_17
Type: pfam
Location: 22626 - 23681 (+)
Gene ID: HRGMv2_3159_27_18
Type: CAZyme
Location: 23703 - 25091 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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