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Cluster: HRGMv2_3159_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3159_14 HRGMv2_3159_14_31 30022 32055 + CBM48 | GH13_9
pfam HRGMv2_3159_14 HRGMv2_3159_14_32 32095 33303 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3159_14 HRGMv2_3159_14_33 33300 34418 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3159_14 HRGMv2_3159_14_34 34555 35988 + GT5
CAZyme HRGMv2_3159_14 HRGMv2_3159_14_35 36069 38498 + GT35
TC HRGMv2_3159_14 HRGMv2_3159_14_36 38723 39886 + 3.A.18.1.1
TC HRGMv2_3159_14 HRGMv2_3159_14_37 39920 41716 + 3.A.1.5.2
Gene ID: HRGMv2_3159_14_31
Type: CAZyme
Location: 30022 - 32055 (+)
Gene ID: HRGMv2_3159_14_32
Type: pfam
Location: 32095 - 33303 (+)
Gene ID: HRGMv2_3159_14_33
Type: pfam
Location: 33300 - 34418 (+)
Gene ID: HRGMv2_3159_14_34
Type: CAZyme
Location: 34555 - 35988 (+)
Gene ID: HRGMv2_3159_14_35
Type: CAZyme
Location: 36069 - 38498 (+)
Gene ID: HRGMv2_3159_14_36
Type: TC
Location: 38723 - 39886 (+)
Gene ID: HRGMv2_3159_14_37
Type: TC
Location: 39920 - 41716 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3159_14_33 vegetarian > vegan 1.18194 0.00701
HRGMv2_3159_14_35 vegetarian > vegan 1.06319 0.00701
HRGMv2_3159_14_36 vegetarian > vegan 1.20135 0.00701

🧭 Explore Read Mapping of CGC

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