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Cluster: HRGMv2_3157_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3157_4 HRGMv2_3157_4_99 104288 104983 + 2.A.122.1.4
CAZyme HRGMv2_3157_4 HRGMv2_3157_4_100 105258 106271 - GH177
TF HRGMv2_3157_4 HRGMv2_3157_4_101 106533 107552 + LacI
TF HRGMv2_3157_4 HRGMv2_3157_4_102 107588 107920 - DUF24
TC HRGMv2_3157_4 HRGMv2_3157_4_103 108173 108709 - 3.A.1.25.5
TC HRGMv2_3157_4 HRGMv2_3157_4_104 108885 110144 + 2.A.49.9.2
pfam HRGMv2_3157_4 HRGMv2_3157_4_105 110179 110808 + TMP-TENI
pfam HRGMv2_3157_4 HRGMv2_3157_4_106 110805 111473 + Hydrolase | HAD | HAD_2
TC HRGMv2_3157_4 HRGMv2_3157_4_107 111603 112988 + 2.A.66.1.26
Gene ID: HRGMv2_3157_4_99
Type: TC
Location: 104288 - 104983 (+)
Gene ID: HRGMv2_3157_4_100
Type: CAZyme
Location: 105258 - 106271 (-)
Gene ID: HRGMv2_3157_4_101
Type: TF
Location: 106533 - 107552 (+)
Gene ID: HRGMv2_3157_4_102
Type: TF
Location: 107588 - 107920 (-)
Gene ID: HRGMv2_3157_4_103
Type: TC
Location: 108173 - 108709 (-)
Gene ID: HRGMv2_3157_4_104
Type: TC
Location: 108885 - 110144 (+)
Gene ID: HRGMv2_3157_4_105
Type: pfam
Location: 110179 - 110808 (+)
Gene ID: HRGMv2_3157_4_106
Type: pfam
Location: 110805 - 111473 (+)
Gene ID: HRGMv2_3157_4_107
Type: TC
Location: 111603 - 112988 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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