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Cluster: HRGMv2_3157_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3157_6 HRGMv2_3157_6_29 34065 34718 - 9.B.18.1.3
STP HRGMv2_3157_6 HRGMv2_3157_6_30 35261 35878 + TetR_N
TC HRGMv2_3157_6 HRGMv2_3157_6_31 35999 37774 + 3.A.1.21.1
TC HRGMv2_3157_6 HRGMv2_3157_6_32 37767 39500 + 3.A.1.21.1
pfam HRGMv2_3157_6 HRGMv2_3157_6_33 39684 40247 - DUF305 | DUF305
pfam HRGMv2_3157_6 HRGMv2_3157_6_34 40490 41236 - adh_short | Epimerase | KR | adh_short_C2 | SDR
TC HRGMv2_3157_6 HRGMv2_3157_6_35 41799 43172 - 2.A.2.3.2
CAZyme HRGMv2_3157_6 HRGMv2_3157_6_36 43188 46244 - GH2
Gene ID: HRGMv2_3157_6_29
Type: TC
Location: 34065 - 34718 (-)
Gene ID: HRGMv2_3157_6_30
Type: STP
Location: 35261 - 35878 (+)
Gene ID: HRGMv2_3157_6_31
Type: TC
Location: 35999 - 37774 (+)
Gene ID: HRGMv2_3157_6_32
Type: TC
Location: 37767 - 39500 (+)
Gene ID: HRGMv2_3157_6_33
Type: pfam
Location: 39684 - 40247 (-)
Gene ID: HRGMv2_3157_6_34
Type: pfam
Location: 40490 - 41236 (-)
Gene ID: HRGMv2_3157_6_35
Type: TC
Location: 41799 - 43172 (-)
Gene ID: HRGMv2_3157_6_36
Type: CAZyme
Location: 43188 - 46244 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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