Cluster: HRGMv2_3145_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3145
- CGC Family ID: CGCFAM_00009
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3145_50 | HRGMv2_3145_50_4 | 2119 | 4944 | - | GH2 |
| pfam | HRGMv2_3145_50 | HRGMv2_3145_50_5 | 5394 | 6797 | - | Methyltransf_11 | Methyltransf_25 |
| TC | HRGMv2_3145_50 | HRGMv2_3145_50_6 | 6794 | 8062 | - | 3.A.1.103.1 |
| TC | HRGMv2_3145_50 | HRGMv2_3145_50_7 | 8077 | 9057 | - | 3.A.1.104.1 |
| CAZyme | HRGMv2_3145_50 | HRGMv2_3145_50_8 | 9133 | 10617 | - | GT2 |
Gene ID: HRGMv2_3145_50_4
Type: CAZyme
Location: 2119 - 4944 (-)
Type: CAZyme
Location: 2119 - 4944 (-)
Gene ID: HRGMv2_3145_50_5
Type: pfam
Location: 5394 - 6797 (-)
Type: pfam
Location: 5394 - 6797 (-)
Gene ID: HRGMv2_3145_50_6
Type: TC
Location: 6794 - 8062 (-)
Type: TC
Location: 6794 - 8062 (-)
Gene ID: HRGMv2_3145_50_7
Type: TC
Location: 8077 - 9057 (-)
Type: TC
Location: 8077 - 9057 (-)
Gene ID: HRGMv2_3145_50_8
Type: CAZyme
Location: 9133 - 10617 (-)
Type: CAZyme
Location: 9133 - 10617 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Timburyella
Species
Timburyella sp900554165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.